Cats love sitting in boxes. But a standard-sized @thorlabs.bsky.social Lab Snacks box is too small, surely? My wife reckoned otherwise, and Rowan was game for giving it a go. He's a small cat, but I didn't think he could pull it off. Turns out he's up for trying it once.
Jonathan Taylor
Jonathan Taylor
@jtimaging.bsky.social
Optical physicist tackling biomedical imaging and measurement problems with realtime computation, maths and computational imaging
191 followers129 following65 posts
Jonathan Taylor reposted
We've had a wave of source data corrections lately across the Nature Portfolio. We wrote an editorial about the importance of bookkeeping and QC when preparing manuscripts. www.nature.com/articles/s41...
Jonathan Taylor reposted
I very much enjoyed Lisa Cuneo's talk at FOM2026 on a new approach to deconvolution, so it's great to see the preprint is now out: www.biorxiv.org/content/10.6... @vicidominilab.bsky.social
Jonathan Taylor reposted
Karlin gave a great talk on his research into optically-gated heart imaging at @iop.org Photon26 last week. At the end of it his side-project "Optical gating: the arcade challenge" proved popular among the audience! Have a go and try and break into the high-score table... optical-gating.netlify.app
Jonathan Taylor reposted
this is amazing, will be using this to teach about social construction of colors in my philosophy class #philsci moultano.wordpress.com/2026/06/19/w...
Jonathan Taylor reposted
Prof Jonathan Taylor of @uofgphysastro.bsky.social is leading a £4m new project with colleagues from @imperialcollegeldn.bsky.social and @sheffielduni.bsky.social to create detailed 3D images of the mechanical forces inside a living, beating heart. Read more here: www.gla.ac.uk/news/headlin...
Jonathan Taylor reposted
@rashmi-priya.bsky.social from @crick.ac.uk is awarded the 2026 BSCB Women in Cell Biology Medal at #DynamicCellVI by @viji-draviam.bsky.social Rashmi delivered a fascinating medal talk about her research on cell and tissue mechanics during heart development.
Jonathan Taylor reposted
Sadly, applications to the Advanced Python summer school have dropped significantly over the past 2 years. Plus, there'll be no external funding for the 1st time in *17 years*. Likely all because of GenAI - but programming skills still matter🔥 Deadline May 3, please help by sharing: aspp.school
Good to see this confirmation about the lumenal macrophages that show up in fli1:gfp zebrafish! We see them zipping around the heart in our beating-heart timelapses like this one (credit: Daniel Olesker). They make it harder to see cell division events - how many divisions can you spot here?
Really cool #zebrafish paper 🧪 from Bart Weijts & Catherine Robin (Hubrecht): starts with the basic question of are those superbright kdrl/fli1a positive cells (that we've all seen in the vascular Tg lines) something special? Yes! They're lumenal macrophages www.nature.com/articles/s41...
Jonathan Taylor reposted
⌨️ The Intermediate Research Software Development Course will take place on 13 - 16 April 2026 at the University of Manchester and will be delivered by EPCC (Chris Wood and Evgenij Belikov) with the help from SSI and Manchester RIT. Find out more at www.software.ac.uk/news/interme...
Jonathan Taylor reposted
Myself and @immunoah.bsky.social are looking to hire a postdoctoral scientist to build a next-generation high-throughput high-resolution light sheet microscope for imaging entire cleared organs/tissues and to further develop live & fixed tissue clearing methods. www.nature.com/naturecareer...
Interested in instrument development & optical microscopy? Join @immunoah.bsky.social & @jamesdmanton.bsky.social developing high-throughput light sheet microscopy to image entire tissues & progressing tissue clearing methods www.nature.com/naturecareer... Closes 07 APR #PostdocJobs #neuroimmunology
Jonathan Taylor reposted
Job alert! 📣 I’m looking for a research assistant to join my new team @idrm.ox.ac.uk Were using #zebrafish to understand gene-environment interactions that shape the heart 🫀generate natural diversity 🐸🐭 and contribute to congenital defects ❤️🩹 Full info below, and please share! 🫶🏻 bit.ly/467TO0M
@retof.bsky.social, I sometimes think of your wish, some time ago, for everyone to have their own hype-man on stage when they are giving a conference presentation. My Teams meeting transcript from today seems to have completely hallucinated a colleague interjecting "ok. yeah! play the song! okay"
Jonathan Taylor reposted
Jonathan Taylor reposted
Another PhD scholarship opportunity @uofglasgow.bsky.social : Black UK-domiciled students can apply for a James McCune Smith PhD www.gla.ac.uk/scholarships...; final application deadline 31st January. Scheme includes external mentors, placements, community-building & networking opportunities.
A great opportunity to come to Glasgow for an interdisciplinary PhD, benefitting from enhanced support and stipend, and a diverse cohort of students alongside you for an inclusive, team experience for your PhD! Please share widely, and spread the word with your undergraduate students.
📣 Applications Now Open! 🌊 Dive into mission-driven interdisciplinary #STEM research with a fully funded 4-year PhD starting Sept 2026 ✅ Co-create your project ✅ Enhanced stipend ✅ Cohort-based experience ✅Partner network 📅 Applicant Webinar: Nov 26 👉More info & registration: www.divein.org.uk/apply
Jonathan Taylor reposted
Did you know zebrafish share many of the same genes as humans? Gage Crump, PhD, Professor and Vice Chair of Stem Cell Biology and Regenerative Medicine at USC Stem Cell, explains how this tiny fish is helping advance human health research. @keckschoolusc.bsky.social
This looks great for learning and improving your research git workflows, "Rather than simply teaching commands, the sessions explore the workflows that make them meaningful". Can connect to the talk online, so no excuses not to join!
🎓 We are pleased to share details of an upcoming hybrid series of short talks featuring #SSIFellow Hui Ling Wong, focusing on practical, research-oriented approaches to using Git. This series of 15-minute talks will run every Tue from 14 Oct to 11 Nov. www.software.ac.uk/news/upcomin...
Jonathan Taylor reposted
🙌 #FOM2026 takes place in Stockholm 🇸🇪 from 🗓️ March 29 to April 1, exploring the latest innovations & developments in optical microscopy. Apply for financial support - up to 10 candidates from underrepresented backgrounds will be supported. 🔬 More info🔽 www.focusonmicroscopy.org/2026-financi...
Jonathan Taylor reposted
🔵 The Carpentries have recently published a new version of Building Better Research Software, a lesson in The Carpentries Incubator designed to serve as a “next steps” workshop after Software Carpentry. Find out more about it and how to get involved at: www.software.ac.uk/news/calling...
Jonathan Taylor reposted
🚨Publication alert🚨 My first, first-author paper is now out in @natphoton.nature.com! Our paper describes an iterative spectral unmixing algorithm and eight-channel camera-based hardware we developed enabling unmixing of low SNR live-cell data at video rates. www.nature.com/articles/s41...
A thoughtful account of why version control is essential for research software: "achieving the highest levels of insight and impact requires robust tooling and reproducibility baked into its core"; "...requires code that can handle significant complexity and can evolve" [1/3]
➡️ In our latest blog post #SSIFellow Hui Ling Wong delves deeper into how version control helps to make research more reproducible as discussed in a recent event at @imperialcollegeldn.bsky.social. Read more at www.software.ac.uk/blog/keeping...
Some wise words on the use of GenAI in scientific activity. "...that is a tacit admission that the work is not worth being done by the scientist. [...] we’ve yielded the opportunity to think about science, discuss our practice, expand our understanding, spark new ideas and develop as researchers."
A few months ago, Nature published how-to guide for using ChatGPT to write your peer reviews in 30 minutes. This is, of course, a horrible idea. Here’s my response with @jbakcoleman.bsky.social .
I'm excited to be co-organising a workshop on Imaging Forces & Mechanobiology in Living Tissues @ Imperial College London, Wed 2 July (with @noelresearchlab.bsky.social & @jvermot.bsky.social). Register here forms.cloud.microsoft/e/hakfMEbgRB by 13 Jun (limited spaces; will confirm acceptance asap)
Jonathan Taylor reposted
As we mark #PrideMonth, we take this moment to celebrate LGBTQ+ identities and also reflect on the ongoing work to make our universities places where every member can thrive. Thank you to colleagues for co-authoring this powerful piece on Rainbow Office Hours ➡️ gla.ac/3Zio6uv #OneTeamUofG 🏳️🌈 🏳️⚧️
Jonathan Taylor reposted
Jonathan Taylor reposted
1. Over the past four months I've talked with many foundation directors about science philanthropy during Trump 2.0. Two things come to the fore every time. i) The most important they can do is maintain the pipeline of talent ii) With the federal govt pulling out, ROI is higher now than ever.
Oof, just got notice HHMI is not even doing Hanna Gray Fellows, or any competition, this year due to the challenging times in science funding rn 😬 Understandable. On the bright side, I was really proud my application🌈 #science #nih #hhmi
Fully-funded and well-supported PhD opportunity for Black UK-domiciled students here at Glasgow University: www.gla.ac.uk/scholarships.... The main call for applications closed in January, but evidently 2 more places have become available - a potential open goal for a suitable applicant! [1/2]
For this scheme, you can choose the topic of study in conjunction with your chosen PhD supervisor. If you are considering PhD study, and are interested and eligible for this opportunity, I would be happy to help link you up with potential supervisors based on the research area you are excited about.
Some wise advice here about how to approach the challenges of PhD study, from the human perspective: www.nature.com/articles/d41...
Wonderful meeting on Friday organised by @glasgowimaging.bsky.social , with inspiring and impressive keynote talk by @alicepyne.bsky.social and a brilliant array of ECR speakers doing cool science driven by imaging. Had some great conversations; looking forward to next year already 😀
Jonathan Taylor reposted
Neil Chue Hong (www.linkedin.com/in/neilchueh...) discusses SSI's £4.8M Research Software Maintenance Fund (www.software.ac.uk/news/ukri-aw...), supporting research software maintenance, and its role in software sustainability. Listen at 🎙️ podcast.sustainoss.org/264
This is a valuable course for UK researchers writing research code and wanting to put their practices on a more robust and open footing, and learn more about best practices in the field.
🧑🏫 The SSI is delivering a course on “Software practices for open and reproducible research” from Tuesday 1-4 April. Find out more about it at www.software.ac.uk/news/worksho...