Leonardo Cotta
Leonardo Cotta
@cottascience.bsky.social
floptimistic from BH🔺🇧🇷 http://cottascience.github.io
1K followers280 following71 posts
scaling laws appeared as "learning curve models" long ago in the literature (90's), and finally people are going back to it. I love the chinchilla paper but that's not the whole story/method arxiv.org/abs/2509.19189
I'm trying to write about the history of scaling laws, and my go-to reference in the ML community is [1]. If anyone has good suggestions in asymptotic stats, I'm curious to read and help make the connections. [1] proceedings.neurips.cc/paper_files/...
I've finally deleted my twitter account, but as much as I love bksy's idea, it doesn't seem to be a good replacement. In terms of keeping up with science, linkedin and reddit have unbelievably proven more effective for me. Is there anything I'm missing here? A feed to follow, a better way to use it?
Leonardo Cotta reposted
We're excited to present our latest article in Nature Machine Intelligence - Boosting the predictive power of protein representations with a corpus of text annotations. Link: www.nature.com/articles/s42... [1/4]
the goat of brazilian music w/ the best of (current) american music www.youtube.com/watch?v=jFUh...
I loved this new preprint by Lourie/Hu/ @kyunghyuncho.bsky.social . If you really wanna convince someone youre training a foundation model, or proposing better methodology, loss scaling laws aren't enough. It has to be tied w/ downstream performance. it shouldn't be vibes arxiv.org/abs/2507.00885
We're at ICML, drop us a line if you're excited about this direction. 📄 Paper: arxiv.org/abs/2507.02083 💻 Code: github.com/h4duan/SciGym 🌍 Website: h4duan.github.io/scigym-bench... 🗂️ Dataset: huggingface.co/datasets/h4d...
I wish we had an ML equivalent of SOSA (Symposium On Simplicity in Algorithms). "simpler algorithms manifest a better understanding of the problem at hand; they are more likely to be implemented and trusted by practitioners; they are more easily taught" www.siam.org/conferences-....
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Please check out our new approach to modeling somatic mutation signatures. DAMUTA has independent Damage and Misrepair signatures whose activities are more interpretable and more predictive of DNA repair defects, than COSMIC SBS signatures 🧬🖥️🧪 www.biorxiv.org/content/10.1...
This is my favourite "graph paper" of the last 1 or 2 years. We also need to start including non-NN baselines, e.g. fingerprints+catboost ---if the goal is real-world impact and not getting it published asap. I also recommend following @wpwalters.bsky.social's blog. arxiv.org/abs/2502.14546
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Unbelievable news. Pancreatic is one of the deadliest cancers. New paper shows personalized mRNA vaccines can induce durable T cells that attack pancreatic cancer, with 75% of patients cancer free at three years—far, far better than standard of care. www.nature.com/articles/s41...
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After 6+ months in the making and over a year of GPU compute, we're excited to release the "Ultra-Scale Playbook": hf.co/spaces/nanot... A book to learn all about 5D parallelism, ZeRO, CUDA kernels, how/why overlap compute & coms with theory, motivation, interactive plots and 4000+ experiments!
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Sad after #AISTATS2025 and #ICLR2025 notifications? As we say in Italy, when a door closes, a bigger one opens ;) If you have a fantastic paper on #uncertainty #AI #ML #causality #statML #probabilisticmodels #reasoning #impreciseprobabilities etc, consider submitting to #UAI2025 🇧🇷 deadline 10 Feb 💥
The 41st Conference on #Uncertainty in #AI will be held in Rio de Janeiro 🇧🇷, July 21-25! The CfP is out 👉 www.auai.org/uai2025/call... 🚨 Feb 10: Paper submission 🗣️ Apr 3-10: rebuttal period 🎉/💀 May 6: Author notification #UAI2025 #ML #stats #learning #reasoning #uncertainty
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Slides of my presentation "Mathematical Foundations of Graph Foundation Models" yesterday at the AMS Session of the #JMM2025. The accompanying paper is coming soon. www.cs.purdue.edu/homes/ribeir...
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very cool observations about using smiles/graphs vs fingerprints. TDLR; fingerprints only capture certain properties marginally, and their combinations can often give rise to something new/different. www.deepmedchem.com/articles/wha...
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Presenting our poster at NeurIPS! Please come chat about estimating causal effects from user/patient-reported experiences: Thursday, 11AM, West Ballroom A-D #5110.
@nikitadhawan.bsky.social developed NATURAL (www.cs.toronto.edu/~nikita/natu...) with @cottascience.bsky.social , Karen & @cmaddis.bsky.social. Its an end-to-end pipeline that starts from raw-text data and ends with a causal (**) effect associated with an intervention. (**) conditions apply 🧵(6/7)
If you're interested in {causality, language, healthcare}, stop by! Thursday 11am - 2pm West Ballroom A-D #5110
@nikitadhawan.bsky.social developed NATURAL (www.cs.toronto.edu/~nikita/natu...) with @cottascience.bsky.social , Karen & @cmaddis.bsky.social. Its an end-to-end pipeline that starts from raw-text data and ends with a causal (**) effect associated with an intervention. (**) conditions apply 🧵(6/7)
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I'm told this is a more intellectual version of ML Twitter :). I have a question... What papers have made good *theoretical* advances towards graph foundation models? Jan 8th 1-2pm I am giving a talk at the Joint Mathematics Meeting on the topic meetings.ams.org/math/jmm2025...
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Replying to @rahulgk.bsky.social
b] ~Billions of dollars each year are spent on trials to assess interventions. Can we use crowdsourced data to know which intervention is likely to work ahead of time? Doing so requires answering a causal question! But the data to answer this question is locked in unstructured text. 🧵(5/7)
Leonardo Cotta reposted
Leonardo Cotta reposted
1/6 We're excited to share our #NeurIPS2024 paper: Probabilistic Graph Rewiring via Virtual Nodes! It addresses key challenges in GNNs, such as over-squashing and under-reaching, while reducing reliance on heuristic rewiring. w/ Chendi Qian, @christophermorris.bsky.social @mniepert.bsky.social 🧵
Unless we hold reviewers and ACs accountable, especially ACs in this case, the acceptance of a paper will be determined by whether your paper got active or inactive reviewers/ac. This is even worse and more frustrating than the usual reviewer quality lottery.
✍️ Reminder to reviewers: Check author responses to your reviews, and ask follow up questions if needed. 50% of papers have discussion - let’s bring this number up!
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Great piece by @yasmincurzi.com for @theconversation.bsky.social about the clash between Brazil's Supreme Court and Elon Musk- and the possible implications for platform regulation in the country. theconversation.com/elon-musks-f...
Leonardo Cotta reposted
escrevi para o The Conversation US sobre o embate entre STF e Elon Musk, destacando suas possíveis implicações para a regulação de plataformas no país. theconversation.com/elon-musks-f...
Leonardo Cotta reposted
bsky is growing, hi! Some areas I work in: Causal ML drsherrirose.org/targeted-learning-book Generalizability onlinelibrary.wiley.com/doi/10.1111/... Ethical ML www.annualreviews.org/doi/abs/10.1... Plan payment www.journals.uchicago.edu/doi/10.1086/... CKD proceedings.mlr.press/v248/cusick24a.html
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