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Nextflow
@nextflow.io

🔬 Erin Weisbart (@broadinstitute.org) presents an end-to-end Nextflow pipeline for pooled Cell Painting, built with @seqera.io. It links 9 image analysis pipelines, with automated QC at each step and gates before the costly final steps. hubs.la/Q04zg59d0 #NextflowSummit

hubs.laEnd-to-end Nextflow pipeline for pooled Cell Painting analysis – Erin Weisbart | Nextflow Summit 2026Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
Seqera
@seqera.io

🧪 Mark Liddell & Joe Reynolds share how @unileveruki.bsky.social productionized BIPODE, a Bayesian method for toxicology points of departure, with Nextflow: 9,600 VM hours in 48 hrs on spot instances. Partners reproduced results with only the docs. hubs.la/Q04zg1hq0 #NextflowSummit

hubs.laProductionising Bayesian Concentration-Response Modelling with Nextflow – Mark Liddell | Nextflow Summit 2026Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
Seqera
@seqera.io

🎯 Which cell types depend most on a drug target? Diego Marques Coelho (UFRN) presents NetPerturb, a scalable, reproducible Nextflow pipeline for GRN inference and in-silico perturbation scoring in scRNA-seq data, using existing data alone. hubs.la/Q04zg4Nq0 #NextflowSummit

hubs.laNetPerturb: scalable in-silico perturbation scoring from scRNA-seq networks – Diego Marques Coelho | Nextflow Summit 2026Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.

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Nextflow
@nextflow.io

💉 Daniel Fabian (Lonza) showed how Nextflow and @seqera.io power omics characterization of dozens of CHO cell lines, turning workflow engineering into a scientific capability for faster, reproducible R&D in biologics manufacturing. hubs.la/Q04zM-590 #NextflowSummit

hubs.laLeveraging Nextflow to Advance Therapeutic Molecule Manufacturing Solutions – Daniel Fabian | Nextflow Summit 2026Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
Nextflow
@nextflow.io

🧬 Annotating non-model eukaryotic genomes? Abdoallah Sharaf (@uni-konstanz.de) presents GeneForge, a Nextflow pipeline built to @nf-co.re standards that unifies BRAKER3 & funannotate for gene prediction, plus optional functional annotation. hubs.la/Q04zg2Xr0 #NextflowSummit

hubs.laGeneForge v2.1 A Comprehensive Nextflow Pipeline for Eukaryotic Genome Annotation – Abdoallah Sharaf | Nextflow Summit 2026Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.
Nextflow
@nextflow.io

🦠 Is a resistance gene on a plasmid or the chromosome, and can you trust it? Daniel Garbozo presents Plastier, a Nextflow pipeline built with @nf-co.re that combines three plasmid classifiers into confidence tiers for S. aureus. hubs.la/Q04B9rXJ0 #NextflowSummit

hubs.laPlastier: A Nextflow Pipeline for Confidence-Calibrated Plasmid–Chromosome Assignment of Antimicrobial Resistance Genes – Daniel Garbozo | Nextflow Summit 2026Join us at Nextflow Summit 2026 for the latest developments and innovations from the Nextflow world.