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I always have it write them. Memory in particular seems almost like an anti-feature, it frequently decides to create memories of things that are actually it doing stuff wrong or that I never asked for, plus it's way more opaque than CLAUDE.md files which are at least co-located with a repo
I periodically ask it to examine CLAUDE or memory to see if there are contradictory instructions. Occasionally it’ll find something that kinda overlaps, and I can see why it hesitates.
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I usually have it update my profile-level and repo level CLAUDE files when new model versions come out. Memory I also just don't like because it feels like tying it to a bunch of arbitrary files on my machine that aren't committed anywhere. I want it to work the same way if I move to another machine